Faculty Publications

 

Publications written by faculty and staff in the Department of Computer Science at the University of Northern Iowa.

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Submissions from 2023

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Hyperbolic matrix factorization improves prediction of drug-target associations, Aleksandar Poleksic

Submissions from 2022

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ML-Based Device-Agnostic Human Activity Detection with WiFi Sniffer Traffic, Harshit Grover, Dheryta Jaisinghani, Nishtha Phutela, and Shivani Mittal

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Unlock Me: A Real-World Driven Smartphone Game to Stimulate COVID-19 Awareness, Nishtha Phutela, Atluri Nikhitha Chowdary, Shreyansh Anchlia, Dheryta Jaisinghani, and Goldie Gabrani

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Creating a High Quality, High Impact CS Teacher Prep Program, J. Ben Schafer and J. Philip East

Submissions from 2021

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Applications and Implications of a General Framework for Self-Stabilizing Overlay Networks, Andrew Berns

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Brief announcement: Network scaffolding for efficient stabilization of the chord overlay network, Andrew Berns

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Teaching the Methods of Teaching CS, Michelle Friend, Anne Leftwich, J. Ben Schafer, Beth Simon, and Briana B. Morrison

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Topic modeling as a tool for analyzing library chat transcripts, Hyun Seung Koh and Mark Fienup

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Overcoming sparseness of biomedical networks to identify drug repositioning candidates, Aleksandar Poleksic

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ReLy: Machine Learning for Ultra-Reliable, Low-Latency Messaging in Industrial Robots, Kunal Sankhe, Dheryta Jaisinghani, and Kaushik Chowdhury

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ADAPT: An auxiliary storage data path toolkit, Weisu Wang, Christopher Meyers, Robert Roy, Sarah Diesburg, and An I.Andy Wang

Submissions from 2020

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Scored out of 10: Experiences with binary grading across the curriculum, Andrew Berns

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Heterogeneous Multi-Layered Network Model for Omics Data Integration and Analysis, Bohyun Lee, Shuo Zhang, Aleksandar Poleksic, and Lei Xie

Submissions from 2019

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Identifying student misconceptions of programming, Lisa C. Kaczmarczyk, Elizabeth R. Petrick, J. Philip East, and Geoffrey L. Herman

Preface, James Noble, Eugene Wallingford, and Uwe Zdun

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Database of adverse events associated with drugs and drug combinations, Aleksandar Poleksic and Lei Xie

Submissions from 2018

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Evaluating elementary student interaction with ubiquitous touch projection technology, Sarah M. DIesburg, C. Adam Feldhaus, Coved Oswald, Cole Boudreau, and Beau Brown

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Predicting serious rare adverse reactions of novel chemicals, Aleksandar Poleksic and Lei Xie

Submissions from 2017

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Mining FDA resources to compute population-specific frequencies of adverse drug reactions, Aleksandar Poleksic, Carson Turner, Rishabh Dalal, Paul Gray, and Lei Xie

Submissions from 2016

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Trueerase: Leveraging an auxiliary data path for per-file secure deletion, Sarah Diesburg, Christopher Meyers, Mark Stanovich, An I.Andy Wang, and Geoff Kuenning

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Is your data gone? measuring user perceptions of deletion, S. Diesburg, C. A. Feldhaus, M. Al Fardan, J. Schlicht, and N. Ploof

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Improved genome-scale multi-target virtual screening via a novel collaborative filtering approach to cold-start problem, Hansaim Lim, Paul Gray, Lei Xie, and Aleksandar Poleksic

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Large-Scale Off-Target Identification Using Fast and Accurate Dual Regularized One-Class Collaborative Filtering and Its Application to Drug Repurposing, Hansaim Lim, Aleksandar Poleksic, Yuan Yao, Hanghang Tong, Di He, Luke Zhuang, Patrick Meng, and Lei Xie

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Large-ScaleOff-Target IdentificationUsing Fast and Accurate Dual Regularized OneClass Collaborative Filtering and Its Application to Drug Repurposing, Hansaim Lim, Alexsandar Poleksic, Yuan Yao, Hanghang Tong, Di He, Luke Zhuang, Patrick Meng, and Lei Xie

Submissions from 2015

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A polynomial time algorithm for computing the area under a GDT curve, Aleksandar Poleksic

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A polynomial time algorithm for computing the area under a GDT curve, Aleksandar Poleksic

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Towards a better measure of protein 3D model quality, Aleksandar Poleksic

Submissions from 2014

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Utilizing twilight zone sequence similarities to increase the accuracy of protein 3D structure comparison, Aleksandar Poleksic and Paul Gray

Submissions from 2013

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Slaying the desktop management dragon with configuration manager 2012, Benjamin Arnold

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Creating your master mind: Personal and professional development through MasterMind groups, Benjamin Arnold, Lucas Friedrichsen, and Mo Nishiyama

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On the difference in quality between current heuristic and optimal solutions to the protein structure alignment problem, Mauricio Arriagada and Aleksandar Poleksic

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On the Difference in Quality between Current Heuristic and Optimal Solutions to the Protein Structure Alignment Problem, Mauricio Arriagada and Aleksandar Poleksic

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Human performance with multiple devices influencing a single cursor, Stephen Hughes, Cody Bardell, and J. Ben Schafer

Preface, James Noble, Ralph Johnson, Uwe Zdun, and Eugene Wallingford

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Improved algorithms for matching r-separated sets with applications to protein structure alignment, Aleksandar Poleksic

Submissions from 2011

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NCATE standards for Preparation of Secondary Computer Science Teachers, J. Philip East, Charmaine Bentley, Joe Kmoch, Stephen Rainwater, and Chris Stephenson

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Interface design to support situation awareness in virtual puppetry, Keisha Harthoorn and Stephen Hughes

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Building parallel, embedded, and real-time applications with Ada, John W. McCormick, Frank Singhoff, and Jérôme Hugues

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Thorstein Veblen, Ken Mccormick

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Optimizing a widely used protein structure alignment measure in expected polynomial time, Aleksandar Poleksic

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Predicted anomalous behavior of C 60 fullerenes on graphite at low temperature: A new hindered cooperative rotational transition, M. W. Roth, M. K. Balasubramanya, P. Bergmann, M. Karl, M. J. Connolly, and Paul A. Gray

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GPU-based cloud performance for LiDAR data processing, Ramanathan Sugumaran, Dossay Oryspayev, and Paul Gray

Submissions from 2009

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Learning computer science: Perceptions, actions and roles, Anders Berglund, Anna Eckerdal, Arnold Pears, Philip East, Päivi Kinnunen, Lauri Malmi, Robert McCartney, Jan Erik Moström, Laurie Murphy, Mark Ratcliffe, Carsten Schulte, Beth Simon, Ioanna Stamouli, and Lynda Thomas

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Algorithms for optimal protein structure alignment, Aleksandar Poleksic

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Island method for estimating the statistical significance of profile-profile alignment scores, Aleksandar Poleksic

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Island method for estimating the statistical significance of profile-profile alignment scores, Aleksandar Poleksic

Submissions from 2007

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Implementations of the CC′01 human – computer interaction guidelines using Bloom's taxonomy, Bill Manaris, Michael Wainer, Arthur E. Kirkpatrick, Rox Ann H. Stalvey, Christine Shannon, Laura Leventhal, Julie Barnes, John Wright, J. Ben Schafer, and Dean Sanders

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Model railroading and computer fundamentals, John W. McCormick

Welcome to SIGAda 2007 from the SIGAda, conference, and program committee chairs, John W. McCormick, Alok Srivastava, and Leemon C. Baird

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Collaborative filtering recommender systems, J. Ben Schafer, Dan Frankowski, Jon Herlocker, and Shilad Sen

Submissions from 2005

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Teaching polymorphism early, Joseph Bergin, Michael Goldweber, Eugene Wallingford, Michael Caspersen, and Michael Kölling

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Test-First Pair-Programming tutorial, Joseph Bergin and Eugene Wallingford

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High performance computing environments without the fuss: The bootable cluster CD, Sarah M. Diesburg, Paul A. Gray, and David Joiner

In-person grading: An evaluative experiment, J. Philip East and J. Ben Schafer

We've been working on the railroad: A laboratory for real-time embedded systems, John W. McCormick

Proceeding of the ACM SIGAda Annual International Conference, SIGAda: Foreword, John W. McCormick and Leemon C. Baird

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Indexing genomic sequence libraries, Kevin C. O'Kane and Matthew J. Lockner

Submissions from 2004

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Applying software design methodology to instructional design, J. Philip East